Package: NCutYX 0.1.1
NCutYX: Clustering of Omics Data of Multiple Types with a Multilayer Network Representation
Omics data come in different forms: gene expression, methylation, copy number, protein measurements and more. 'NCutYX' allows clustering of variables, of samples, and both variables and samples (biclustering), while incorporating the dependencies across multiple types of Omics data. (SJ Teran Hidalgo et al (2017), <doi:10.1186/s12864-017-3990-1>).
Authors:
NCutYX_0.1.1.tar.gz
NCutYX_0.1.1.zip(r-4.5)NCutYX_0.1.1.zip(r-4.4)NCutYX_0.1.1.zip(r-4.3)
NCutYX_0.1.1.tgz(r-4.4-x86_64)NCutYX_0.1.1.tgz(r-4.4-arm64)NCutYX_0.1.1.tgz(r-4.3-x86_64)NCutYX_0.1.1.tgz(r-4.3-arm64)
NCutYX_0.1.1.tar.gz(r-4.5-noble)NCutYX_0.1.1.tar.gz(r-4.4-noble)
NCutYX_0.1.1.tgz(r-4.4-emscripten)NCutYX_0.1.1.tgz(r-4.3-emscripten)
NCutYX.pdf |NCutYX.html✨
NCutYX/json (API)
NEWS
| # Install 'NCutYX' in R: |
| install.packages('NCutYX', repos = c('https://seborinos.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/seborinos/ncutyx/issues
- brca.data.cna - Data on copy number aberrations from breast cancer patients.
- brca.data.ge - Data on gene expression from breast cancer patients.
- brca.data.rppa - Data on protein measurements from breast cancer patients.
- cesc.data.cna - Data on copy number aberrations from cervical cancer patients.
- cesc.data.ge - Data on gene expression from breast cancer patients.
- cesc.data.rppa - Data on protein measurements from cervical cancer patients.
c-plus-pluscancer-genomicsclusteringcopy-number-variationdevtoolsgene-expressiongraph-algorithmsgraph-cutgraphsproteinsrcpp
Last updated 7 years agofrom:f245c58a2e. Checks:OK: 1 WARNING: 8. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 06 2024 |
| R-4.5-win-x86_64 | WARNING | Nov 06 2024 |
| R-4.5-linux-x86_64 | WARNING | Nov 06 2024 |
| R-4.4-win-x86_64 | WARNING | Nov 06 2024 |
| R-4.4-mac-x86_64 | WARNING | Nov 06 2024 |
| R-4.4-mac-aarch64 | WARNING | Nov 06 2024 |
| R-4.3-win-x86_64 | WARNING | Nov 06 2024 |
| R-4.3-mac-x86_64 | WARNING | Nov 06 2024 |
| R-4.3-mac-aarch64 | WARNING | Nov 06 2024 |
Exports:ancutawncutawncut.selectionErrorRatemlbncutmuncutncutpwncut
Dependencies:codetoolsdotCall64fieldsforeachglmnetiteratorslatticemapsMASSMatrixmvtnormRcppRcppEigenshapespamsurvivalviridisLite
